Name PhD Year Current Position Thesis Topic
Michael Hunter 1995 Associate Director of Protein Sciences
Johnson & Johnson
La Jolla, CA
The structure and function of the fifth EGF-like domain of thrombomodulin
Chris White 1996 President and CEO
White Labs, Inc.
San Diego, CA
Expression and characterization of small fragments of thrombomodulin
David Meininger 1997 Head of Protein Chemistry
Palo Alto, CA
The solution structure and function of the fourth and fifth EGF-like domains of thrombomodulin
Benedetta Sampoli-Benitez 1999 Chair, Department of Chemistry
Marymount Manhattan College
New York, NY
Structure and dynamics of EGF-like domains of thrombomodulin
Matthew J. Wood 2000 Associate Professor, Department of Environmental Health and Toxicology
University of California, Davis
Davis, CA
Solution structure and backbone dynamics of the thrombomodulin fragments TMEGF45 and TMEGF45ox
Jeffrey G. Mandell 2000 Senior Scientist
San Diego, CA
Protein protein interactions studied by hydrogen-deuterium exchange and computer-aided docking
Kerney J Glover 2001 Associate Professor
Lehigh University
Bethlehem, PA
Interactions of transmembrane domains with lipid bilayers in phospholipid bicelles
Jennifer Whiles-Lillig 2001 Professor
Sonoma State University
Sonoma, CA
Bicelles: a new system for studying membrane associated peptides and proteins
Abel Baerga-Ortiz 2002 Assistant Professor
University of Puerto Rico
San Juan, PR
The energetics of the thrombin-thrombomodulin interaction
Carrie Hughes (now Croy) 2003 Scientist
Monarch Biosciences
Indianapolis, IN
Protein-protein interactions and dynamics probed by H/2H exchange
Johnny Croy 2003 Scientist
Eli Lilly
Indianapolis, IN
Characterization of ligands binding to the low density lipoprotein receptor-related protein (LRP1)
Judith Helena Prieto 2005 Assistant Professor
Western connecticut State University
Danbury, CT
Correlations between dynamic motions and function in modular proteins
Julia Koeppe 2006 Assistant Professor
Ursinus College
Collegeville, PA
The Thrombin-Thrombomodulin Interaction
Muneera Beach 2008 Field Application Specialist
MicrocCal/ GE Biosciences
San Diego, CA
Thermodynamics and the Role of Allostery in the Thrombin-Thrombomodulin Interaction
Simon Bergqvist, Ph.D. postdoc Senior Scientist
San Diego, CA
Kinetics and Thermodynamics of the NFkB-IkB Interaction
Stephanie Truhlar, Ph.D. postdoc Senior Scientist
Eli Lilly
San Diego, CA
Folding and Binding in the NFkB-IkB Interaction
Diego Ferreiro, Ph.D. postdoc Assistant Professor
University of Buenos Aires
Buenos Aires, AR
Folding and Binding in the NFkB-IkB Interaction
Miklos Guttman 2009 NIH postdoctoral fellow
University of Washington
Seattle, WA
Intracellular and Extracellular Interactions of the Low Density Lipoprotein Receptor Related Protein (LRP-1)
Carla Cervantes 2009 Postdoctoral fellow
The Scripps Research Institute
La Jolla, CA
NMR Studies of I kappa B alpha and its Interaction with the Transcriptional Regulator NF kappaB
Reshma Jagasia postdoc Targeting of thrombomodulin to platelets
Ingrid Devries 2011 Postdoctoral fellow
Northeastern University
Boston, MA
The effect of consensus mutation on the folding and binding kinetics of I(kappa)B(alpha)
Mela Mulvihill 2011 postdoctoral fellow
UC Berkeley
Berkeley, CA
Post-translational modifications in intrinsically disordered regions and their contribution to protein-protein interactions
Jorge Gonzalez postdoc Scientist
Beckman Coulter
La Brea, CA
Single molecule FRET studies of IkBs
Brian Fuglestad 2013 postdoctoral fellow
University of Pennsylvania
Philadelphia, PA
Exploring the Dynamics of Thrombin by NMR
Nicholas Treuheit 2013 Scientist
Pfenex, Inc.
San Diego, CA
Thermodynamics of the thrombin-thrombomodulin interaction
Vera Alverdi postdoc consultant Stopped-flow kinetics of NFkB-IkB and NFkB-DNA interactions
Jesse Meyer 2015 postdoctoral fellow
Buck Institute
Novel proteomics methods for increased sensitivity, greater proteome coverage, and global profiling of endogenous SUMO modification sites
Lindsey Handley 2015 Co-Founder and COO
ThoughtSTEM, LLC
Protein Dynamics and Allostery in Thrombin and Thrombomodulin
Deepa Balasubramaniam postdoc Scientist
Merck, Inc. New Jersey
The ASB9-CK interaction
Holly Dembinski 2015,postdoc Scientist

NFkB-IkB and NFkB-DNA interactions
Tobias Kromann-Tofting postdoc Dynamic allostery in serine protease